Get Started with SCIntRuler
Introducrtion | 1. Installation | 2. Explore with an example data | Overview of the data | Data pre-process and visulization with Seurat | UMAP separated by Study | UMAP separated by cell type | Try different data integration methods | Run Seurat CCA | Run Harmony | UMAP figures for all integrated data | 3. Applying SCIntRuler to example data | Calculate SCIntRuler and and an associated visualization | SessionInfo