Package: SuperSurv 0.1.2

SuperSurv: A Unified Framework for Machine Learning Ensembles in Survival Analysis
Implements a Super Learner framework for right-censored survival data. The package fits convex combinations of parametric, semiparametric, and machine learning survival learners by minimizing cross-validated risk using inverse probability of censoring weighting (IPCW). It provides tools for automated hyperparameter grid search, high-dimensional variable screening, and evaluation of prediction performance using metrics such as the Brier score, Uno's C-index, and time-dependent area under the curve (AUC). Additional utilities support model interpretation for survival ensembles, including Shapley additive explanations (SHAP), and estimation of covariate-adjusted restricted mean survival time (RMST) contrasts. The methodology is related to treatment-specific survival curve estimation using machine learning described by Westling et al. (2024) <doi:10.1080/01621459.2023.2205060>, and the unified ensemble framework described in Lyu et al. (2026) <doi:10.64898/2026.03.11.711010>.
Authors:
SuperSurv_0.1.2.tar.gz
SuperSurv_0.1.2.zip(r-4.7)SuperSurv_0.1.2.zip(r-4.6)SuperSurv_0.1.2.zip(r-4.5)
SuperSurv_0.1.2.tgz(r-4.6-any)SuperSurv_0.1.2.tgz(r-4.5-any)
SuperSurv_0.1.2.tar.gz(r-4.7-any)SuperSurv_0.1.2.tar.gz(r-4.6-any)
SuperSurv_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SuperSurv/json (API)
| # Install 'SuperSurv' in R: |
| install.packages('SuperSurv', repos = c('https://yuelyu21.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/yuelyu21/supersurv/issues
Pkgdown/docs site:https://yuelyu21.github.io
- metabric - METABRIC Breast Cancer Dataset
Last updated from:230703e7aa. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 208 | ||
| source / vignettes | OK | 395 | ||
| linux-release-x86_64 | OK | 205 | ||
| macos-release-arm64 | OK | 233 | ||
| macos-oldrel-arm64 | OK | 204 | ||
| windows-devel | OK | 273 | ||
| windows-release | OK | 153 | ||
| windows-oldrel | OK | 157 | ||
| wasm-release | OK | 143 |
Exports:censor_weightscreate_gridestimate_marginal_rmsteval_briereval_cindexeval_summaryeval_timeROCeval_timesevent_weightsexplain_kernelexplain_survexlearner_nameslist_wrappersplot_beeswarmplot_benchmarkplot_calibrationplot_dependenceplot_global_importanceplot_marginal_rmst_curveplot_patient_waterfallplot_predictplot_rmst_vs_obsplot_survival_heatmapscreen.allscreen.elasticnetscreen.glmnetscreen.margscreen.rfsrcscreen.varselected_variablesSuperSurvsurv.aorsfsurv.bartsurv.coxboostsurv.coxphsurv.exponentialsurv.gamsurv.gbmsurv.glmnetsurv.kmsurv.loglogisticsurv.lognormalsurv.parametricsurv.rangersurv.rfsrcsurv.ridgesurv.rpartsurv.svmsurv.weibullsurv.xgboosttraining_variables
Dependencies:clicodetoolsdigestdplyrfuturefuture.applygenericsglobalsgluelatticelifecyclelistenvmagrittrMatrixnnlsparallellypillarpkgconfigR6rlangsurvivaltibbletidyselectutf8vctrswithr
Installation & Setup
Rendered frominstallation.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-03-03
SuperSurv with Ensemble
Rendered fromsupersurv-ensemble.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Model Performance & Benchmarking
Rendered frommodel-performance.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Ensemble vs. Best Model Selection
Rendered fromsupersurv-best.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
High-Dimensional Data & Variable Screening
Rendered fromscreening-methods.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Advanced Hyperparameter Tuning & Grid Search
Rendered fromgrid-search.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-03-03
Machine Learning with Random Survival Forests
Rendered frombase-learner-rfsrc.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Parametric Survival Models
Rendered fromparametric-models.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Interpreting the Black Box with SHAP & survex
Rendered fromshap-explanations.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-02-25
Causal Effects and Adjusted Marginal Contrasts (RMST)
Rendered fromcausal-rmst.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-03
Started: 2026-03-02
Scaling Up with Parallel Processing
Rendered fromscaleup-parallel.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-03-03
Started: 2026-02-25
Extending SuperSurv
Rendered fromextending-supersurv.Rmdusingknitr::rmarkdownon Jun 03 2026.Last update: 2026-05-01
Started: 2026-04-21
